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Identifier Index
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M
m2rotaxis()
(in
Bio.PDB.vectors
)
McrI
(in
Bio.Restriction.Restriction
)
Motif
(in
Bio.motifs.jaspar
)
MabI
(in
Bio.Restriction.Restriction
)
mean()
(in
GraphData
)
Motif
(in
Bio.motifs.meme
)
MACHEP
(in
Bio.codonalign.chisq
)
mean()
(in
PositionSpecificScoringMatrix
)
Motif
(in
Bio.motifs.transfac
)
MaeI
(in
Bio.Restriction.Restriction
)
Medline
(in
Bio
)
motifs
(in
Bio
)
MaeII
(in
Bio.Restriction.Restriction
)
medline_id()
(in
_FeatureConsumer
)
move_track()
(in
Diagram
)
MaeIII
(in
Bio.Restriction.Restriction
)
medline_id()
(in
_RecordConsumer
)
Mox20I
(in
Bio.Restriction.Restriction
)
MafftCommandline
(in
Bio.Align.Applications._Mafft
)
MeltingTemp
(in
Bio.SeqUtils
)
Mph1103I
(in
Bio.Restriction.Restriction
)
MafIndex
(in
Bio.AlignIO.MafIO
)
meme
(in
Bio.motifs
)
MRBAYESSAFE
(in
Bio.Nexus.Nexus
)
MAFINDEX_VERSION
(in
Bio.AlignIO.MafIO
)
merge_with_support()
(in
Tree
)
MreI
(in
Bio.Restriction.Restriction
)
MafIO
(in
Bio.AlignIO
)
Meth_Dep
(in
Bio.Restriction.Restriction
)
MroI
(in
Bio.Restriction.Restriction
)
MafIterator()
(in
Bio.AlignIO.MafIO
)
Meth_Undep
(in
Bio.Restriction.Restriction
)
MroNI
(in
Bio.Restriction.Restriction
)
MafWriter
(in
Bio.AlignIO.MafIO
)
methods
(in
DistanceTreeConstructor
)
MroXI
(in
Bio.Restriction.Restriction
)
main()
(in
Bio.Wise.dnal
)
MfeI
(in
Bio.Restriction.Restriction
)
MSAProbsCommandline
(in
Bio.Align.Applications._MSAProbs
)
main()
(in
Bio.Wise
)
MflI
(in
Bio.Restriction.Restriction
)
MscI
(in
Bio.Restriction.Restriction
)
main()
(in
Bio.Wise.psw
)
MhlI
(in
Bio.Restriction.Restriction
)
MseI
(in
Bio.Restriction.Restriction
)
majority_consensus()
(in
Bio.Phylo.Consensus
)
min
(in
PositionSpecificScoringMatrix
)
MsfIO
(in
Bio.AlignIO
)
make_back_table()
(in
Bio.Data.CodonTable
)
min_dist()
(in
Bio.PDB.ResidueDepth'
)
MsfIterator
(in
Bio.AlignIO.MsfIO
)
make_dssp_dict()
(in
Bio.PDB.DSSP'
)
minimal
(in
Bio.motifs
)
MslI
(in
Bio.Restriction.Restriction
)
make_entropy()
(in
SeqMat
)
minimum()
(in
Writer
)
Msp20I
(in
Bio.Restriction.Restriction
)
make_format()
(in
PrintFormat
)
MissingExternalDependencyError
(in
Bio
)
MspA1I
(in
Bio.Restriction.Restriction
)
make_log_odds_matrix()
(in
Bio.SubsMat
)
MissingPythonDependencyError
(in
Bio
)
MspCI
(in
Bio.Restriction.Restriction
)
make_table()
(in
Bio.SeqUtils.MeltingTemp
)
miyata
(in
Bio.SubsMat.MatrixInfo
)
MspGI
(in
Bio.Restriction.Restriction
)
make_virtual_offset()
(in
Bio.bgzf
)
MjaIV
(in
Bio.Restriction.Restriction
)
MspI
(in
Bio.Restriction.Restriction
)
MalI
(in
Bio.Restriction.Restriction
)
MkaDII
(in
Bio.Restriction.Restriction
)
MspI7II
(in
Bio.Restriction.Restriction
)
Map
(in
Bio.KEGG
)
mktest()
(in
Bio.codonalign.codonalignment
)
MspI7IV
(in
Bio.Restriction.Restriction
)
map()
(in
Hit
)
ml_estimator()
(in
AbstractTrainer
)
MspJI
(in
Bio.Restriction.Restriction
)
maps
(in
Pathway
)
MlsI
(in
Bio.Restriction.Restriction
)
MspR9I
(in
Bio.Restriction.Restriction
)
MaqI
(in
Bio.Restriction.Restriction
)
Mlu211III
(in
Bio.Restriction.Restriction
)
MspSC27II
(in
Bio.Restriction.Restriction
)
MarkovModel
(in
Bio.HMM
)
MluCI
(in
Bio.Restriction.Restriction
)
MssI
(in
Bio.Restriction.Restriction
)
MarkovModel
(in
Bio
)
MluI
(in
Bio.Restriction.Restriction
)
MstI
(in
Bio.Restriction.Restriction
)
MarkovModel
(in
Bio.MarkovModel
)
MluNI
(in
Bio.Restriction.Restriction
)
MteI
(in
Bio.Restriction.Restriction
)
MarkovModelBuilder
(in
Bio.HMM.MarkovModel
)
Mly113I
(in
Bio.Restriction.Restriction
)
MtuHN878II
(in
Bio.Restriction.Restriction
)
mask
(in
Motif
)
MlyI
(in
Bio.Restriction.Restriction
)
mult_align()
(in
Bio.FSSP.FSSPTools
)
mast
(in
Bio.motifs
)
MMCIF2Dict
(in
Bio.PDB
)
multalign()
(in
_AlignmentConsumer
)
match()
(in
Bio.triefind
)
MMCIF2Dict
(in
Bio.PDB.MMCIF2Dict
)
MultiGraph
(in
Bio.Pathway.Rep
)
match_all()
(in
Bio.triefind
)
mmcif_order
(in
Bio.PDB.mmcifio
)
MultiGraph
(in
Bio.Pathway.Rep.MultiGraph
)
matches()
(in
Bio.Phylo.NeXMLIO
)
mmcifio
(in
Bio.PDB
)
multiple_value_keys
(in
Motif
)
matching
(in
Bio.Restriction.Restriction
)
MMCIFIO
(in
Bio.PDB.mmcifio
)
MultipleAlignment
(in
Bio.Blast.Record
)
matrix
(in
Bio.motifs
)
MMCIFParser
(in
Bio.PDB.MMCIFParser'
)
MultipleSeqAlignment
(in
Bio.Align
)
matrix()
(in
_ParametersConsumer
)
MMCIFParser'
(in
Bio.PDB
)
MunI
(in
Bio.Restriction.Restriction
)
MatrixInfo
(in
Bio.SubsMat
)
MmeI
(in
Bio.Restriction.Restriction
)
Murphy10
(in
Bio.Alphabet.Reduced
)
MauBI
(in
Bio.Restriction.Restriction
)
mmtf
(in
Bio.PDB
)
Murphy15
(in
Bio.Alphabet.Reduced
)
MauveIO
(in
Bio.AlignIO
)
mmtfio
(in
Bio.PDB.mmtf
)
Murphy4
(in
Bio.Alphabet.Reduced
)
MauveIterator
(in
Bio.AlignIO.MauveIO
)
MMTFIO
(in
Bio.PDB.mmtf.mmtfio
)
Murphy8
(in
Bio.Alphabet.Reduced
)
MauveWriter
(in
Bio.AlignIO.MauveIO
)
MMTFParser
(in
Bio.PDB.mmtf
)
murphy_10
(in
Bio.Alphabet.Reduced
)
max
(in
PositionSpecificScoringMatrix
)
MnlI
(in
Bio.Restriction.Restriction
)
murphy_10_tab
(in
Bio.Alphabet.Reduced
)
MAX_ALIGNMENTS
(in
Bio.pairwise2
)
Model
(in
Bio.PDB
)
murphy_15
(in
Bio.Alphabet.Reduced
)
MAX_ITERATIONS
(in
Bio.MarkovModel
)
Model
(in
Bio.PDB.Model
)
murphy_15_tab
(in
Bio.Alphabet.Reduced
)
MAX_READ_UNTIL
(in
Bio.SearchIO.HHsuiteIO.hhsuite2_text
)
model_sequences()
(in
_DescriptionConsumer
)
murphy_4
(in
Bio.Alphabet.Reduced
)
max_tries
(in
Bio.Entrez
)
models
(in
DistanceCalculator
)
murphy_4_tab
(in
Bio.Alphabet.Reduced
)
MAX_WIDTH
(in
_InsdcWriter
)
modify()
(in
ScoreDistribution
)
murphy_8
(in
Bio.Alphabet.Reduced
)
MaxEntropy
(in
Bio
)
mol_seq()
(in
Parser
)
murphy_8_tab
(in
Bio.Alphabet.Reduced
)
MaxEntropy
(in
Bio.MaxEntropy
)
mol_seq()
(in
Writer
)
MuscleCommandline
(in
Bio.Align.Applications._Muscle
)
maximum()
(in
Writer
)
molar_extinction_coefficient()
(in
ProteinAnalysis
)
MutableSeq
(in
Bio.Seq
)
MaxSize
(in
PrintFormat
)
molecular_weight()
(in
ProteinAnalysis
)
Mva1269I
(in
Bio.Restriction.Restriction
)
Mba11I
(in
Bio.Restriction.Restriction
)
molecular_weight()
(in
Bio.SeqUtils
)
MvaI
(in
Bio.Restriction.Restriction
)
MbiI
(in
Bio.Restriction.Restriction
)
molecule_type()
(in
_FeatureConsumer
)
MvnI
(in
Bio.Restriction.Restriction
)
MboI
(in
Bio.Restriction.Restriction
)
MolSeq
(in
Bio.Phylo.PhyloXML
)
MwoI
(in
Bio.Restriction.Restriction
)
MboII
(in
Bio.Restriction.Restriction
)
monoisotopic_protein_weights
(in
Bio.Data.IUPACData
)
Mysql_dbutils
(in
BioSQL.DBUtils
)
McaTI
(in
Bio.Restriction.Restriction
)
monoisotopic_unambiguous_dna_weights
(in
Bio.Data.IUPACData
)
MysqlConnectorAdaptor
(in
BioSQL.BioSeqDatabase
)
mclach
(in
Bio.SubsMat.MatrixInfo
)
monoisotopic_unambiguous_rna_weights
(in
Bio.Data.IUPACData
)
Mcr10I
(in
Bio.Restriction.Restriction
)
Motif
(in
Bio.motifs
)
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