Trees
Indices
Help
Biopython
[
hide private
]
[
frames
] |
no frames
]
Identifier Index
[
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
_
]
B
b
(in
ColorSpiral
)
BlatPslIndexer
(in
Bio.SearchIO.BlatIO
)
BsoBI
(in
Bio.Restriction.Restriction
)
back_table
(in
CodonTable
)
BlatPslParser
(in
Bio.SearchIO.BlatIO
)
Bsp119I
(in
Bio.Restriction.Restriction
)
back_transcribe()
(in
Seq
)
BlatPslWriter
(in
Bio.SearchIO.BlatIO
)
Bsp120I
(in
Bio.Restriction.Restriction
)
back_transcribe()
(in
UnknownSeq
)
Ble402II
(in
Bio.Restriction.Restriction
)
Bsp1286I
(in
Bio.Restriction.Restriction
)
back_transcribe()
(in
Bio.Seq
)
BlnI
(in
Bio.Restriction.Restriction
)
Bsp13I
(in
Bio.Restriction.Restriction
)
background
(in
Motif
)
BloAII
(in
Bio.Restriction.Restriction
)
Bsp1407I
(in
Bio.Restriction.Restriction
)
backward_algorithm()
(in
AbstractDPAlgorithms
)
Block
(in
Bio.Nexus.Nexus
)
Bsp143I
(in
Bio.Restriction.Restriction
)
BaeGI
(in
Bio.Restriction.Restriction
)
block_size
(in
BlastXmlIndexer
)
Bsp1720I
(in
Bio.Restriction.Restriction
)
BaeI
(in
Bio.Restriction.Restriction
)
BLOCKS_PER_LINE
(in
EmblWriter
)
Bsp19I
(in
Bio.Restriction.Restriction
)
Bag18758I
(in
Bio.Restriction.Restriction
)
blosum100
(in
Bio.SubsMat.MatrixInfo
)
Bsp24I
(in
Bio.Restriction.Restriction
)
BalI
(in
Bio.Restriction.Restriction
)
blosum30
(in
Bio.SubsMat.MatrixInfo
)
Bsp3004IV
(in
Bio.Restriction.Restriction
)
BamHI
(in
Bio.Restriction.Restriction
)
blosum35
(in
Bio.SubsMat.MatrixInfo
)
Bsp460III
(in
Bio.Restriction.Restriction
)
BanI
(in
Bio.Restriction.Restriction
)
blosum40
(in
Bio.SubsMat.MatrixInfo
)
Bsp68I
(in
Bio.Restriction.Restriction
)
BanII
(in
Bio.Restriction.Restriction
)
blosum45
(in
Bio.SubsMat.MatrixInfo
)
BspACI
(in
Bio.Restriction.Restriction
)
BanLI
(in
Bio.Restriction.Restriction
)
blosum50
(in
Bio.SubsMat.MatrixInfo
)
BspANI
(in
Bio.Restriction.Restriction
)
BarChartDistribution
(in
Bio.Graphics.Distribution
)
blosum55
(in
Bio.SubsMat.MatrixInfo
)
BspCNI
(in
Bio.Restriction.Restriction
)
BarI
(in
Bio.Restriction.Restriction
)
blosum60
(in
Bio.SubsMat.MatrixInfo
)
BspD6I
(in
Bio.Restriction.Restriction
)
base_count()
(in
_FeatureConsumer
)
blosum62
(in
Bio.SubsMat.MatrixInfo
)
BspDI
(in
Bio.Restriction.Restriction
)
base_count()
(in
_RecordConsumer
)
blosum65
(in
Bio.SubsMat.MatrixInfo
)
BspEI
(in
Bio.Restriction.Restriction
)
BASE_FEATURE_FORMAT
(in
Record
)
blosum70
(in
Bio.SubsMat.MatrixInfo
)
BspFNI
(in
Bio.Restriction.Restriction
)
BASE_FORMAT
(in
Record
)
blosum75
(in
Bio.SubsMat.MatrixInfo
)
BspGI
(in
Bio.Restriction.Restriction
)
base_id
(in
Motif
)
blosum80
(in
Bio.SubsMat.MatrixInfo
)
BspHI
(in
Bio.Restriction.Restriction
)
base_number()
(in
_FeatureConsumer
)
blosum85
(in
Bio.SubsMat.MatrixInfo
)
BspLI
(in
Bio.Restriction.Restriction
)
baseml
(in
Bio.Phylo.PAML
)
blosum90
(in
Bio.SubsMat.MatrixInfo
)
BspLU11I
(in
Bio.Restriction.Restriction
)
Baseml
(in
Bio.Phylo.PAML.baseml
)
blosum95
(in
Bio.SubsMat.MatrixInfo
)
BspMAI
(in
Bio.Restriction.Restriction
)
BasemlError
(in
Bio.Phylo.PAML.baseml
)
BlpI
(in
Bio.Restriction.Restriction
)
BspMI
(in
Bio.Restriction.Restriction
)
BaseTree
(in
Bio.Phylo
)
BlsI
(in
Bio.Restriction.Restriction
)
BspMII
(in
Bio.Restriction.Restriction
)
BasicChromosome
(in
Bio.Graphics
)
blue()
(in
Writer
)
BspNCI
(in
Bio.Restriction.Restriction
)
Bau1417V
(in
Bio.Restriction.Restriction
)
Blunt
(in
Bio.Restriction.Restriction
)
BspOI
(in
Bio.Restriction.Restriction
)
BauI
(in
Bio.Restriction.Restriction
)
blunt()
(in
Analysis
)
BspPI
(in
Bio.Restriction.Restriction
)
BaumWelchTrainer
(in
Bio.HMM.Trainer
)
BmcAI
(in
Bio.Restriction.Restriction
)
BspQI
(in
Bio.Restriction.Restriction
)
Bbr52II
(in
Bio.Restriction.Restriction
)
Bme1390I
(in
Bio.Restriction.Restriction
)
BspT104I
(in
Bio.Restriction.Restriction
)
Bbr57III
(in
Bio.Restriction.Restriction
)
Bme18I
(in
Bio.Restriction.Restriction
)
BspT107I
(in
Bio.Restriction.Restriction
)
Bbr7017II
(in
Bio.Restriction.Restriction
)
BmeDI
(in
Bio.Restriction.Restriction
)
BspTI
(in
Bio.Restriction.Restriction
)
Bbr7017III
(in
Bio.Restriction.Restriction
)
BmeRI
(in
Bio.Restriction.Restriction
)
BspTNI
(in
Bio.Restriction.Restriction
)
BbrPI
(in
Bio.Restriction.Restriction
)
BmeT110I
(in
Bio.Restriction.Restriction
)
BsrBI
(in
Bio.Restriction.Restriction
)
BbsI
(in
Bio.Restriction.Restriction
)
BmgBI
(in
Bio.Restriction.Restriction
)
BsrDI
(in
Bio.Restriction.Restriction
)
BbuB31I
(in
Bio.Restriction.Restriction
)
BmgI
(in
Bio.Restriction.Restriction
)
BsrFI
(in
Bio.Restriction.Restriction
)
BbuB31II
(in
Bio.Restriction.Restriction
)
BmgT120I
(in
Bio.Restriction.Restriction
)
BsrGI
(in
Bio.Restriction.Restriction
)
Bbv12I
(in
Bio.Restriction.Restriction
)
BmiI
(in
Bio.Restriction.Restriction
)
BsrI
(in
Bio.Restriction.Restriction
)
BbvCI
(in
Bio.Restriction.Restriction
)
BmrFI
(in
Bio.Restriction.Restriction
)
BssAI
(in
Bio.Restriction.Restriction
)
BbvI
(in
Bio.Restriction.Restriction
)
BmrI
(in
Bio.Restriction.Restriction
)
BssECI
(in
Bio.Restriction.Restriction
)
BbvII
(in
Bio.Restriction.Restriction
)
BmsI
(in
Bio.Restriction.Restriction
)
BssHII
(in
Bio.Restriction.Restriction
)
bc()
(in
Writer
)
BmtI
(in
Bio.Restriction.Restriction
)
BssMI
(in
Bio.Restriction.Restriction
)
BccI
(in
Bio.Restriction.Restriction
)
BmuI
(in
Bio.Restriction.Restriction
)
BssNAI
(in
Bio.Restriction.Restriction
)
Bce3081I
(in
Bio.Restriction.Restriction
)
bootstrap()
(in
Nexus
)
BssNI
(in
Bio.Restriction.Restriction
)
Bce83I
(in
Bio.Restriction.Restriction
)
bootstrap()
(in
Bio.Phylo.Consensus
)
BssSI
(in
Bio.Restriction.Restriction
)
BceAI
(in
Bio.Restriction.Restriction
)
bootstrap_consensus()
(in
Bio.Phylo.Consensus
)
BssT1I
(in
Bio.Restriction.Restriction
)
BcefI
(in
Bio.Restriction.Restriction
)
bootstrap_trees()
(in
Bio.Phylo.Consensus
)
Bst1107I
(in
Bio.Restriction.Restriction
)
BceSIV
(in
Bio.Restriction.Restriction
)
bounds
(in
Entry
)
Bst2BI
(in
Bio.Restriction.Restriction
)
BcgI
(in
Bio.Restriction.Restriction
)
bounds
(in
Graphics
)
Bst2UI
(in
Bio.Restriction.Restriction
)
BciT130I
(in
Bio.Restriction.Restriction
)
bounds
(in
Pathway
)
Bst4CI
(in
Bio.Restriction.Restriction
)
BciVI
(in
Bio.Restriction.Restriction
)
BoxI
(in
Bio.Restriction.Restriction
)
Bst6I
(in
Bio.Restriction.Restriction
)
BclI
(in
Bio.Restriction.Restriction
)
BpiI
(in
Bio.Restriction.Restriction
)
BstACI
(in
Bio.Restriction.Restriction
)
BcnI
(in
Bio.Restriction.Restriction
)
BplI
(in
Bio.Restriction.Restriction
)
BstAFI
(in
Bio.Restriction.Restriction
)
BcoDI
(in
Bio.Restriction.Restriction
)
BpmI
(in
Bio.Restriction.Restriction
)
BstAPI
(in
Bio.Restriction.Restriction
)
BcuI
(in
Bio.Restriction.Restriction
)
Bpu10I
(in
Bio.Restriction.Restriction
)
BstAUI
(in
Bio.Restriction.Restriction
)
BdaI
(in
Bio.Restriction.Restriction
)
Bpu1102I
(in
Bio.Restriction.Restriction
)
BstBAI
(in
Bio.Restriction.Restriction
)
BeforePosition
(in
Bio.SeqFeature
)
Bpu14I
(in
Bio.Restriction.Restriction
)
BstBI
(in
Bio.Restriction.Restriction
)
benner22
(in
Bio.SubsMat.MatrixInfo
)
BpuEI
(in
Bio.Restriction.Restriction
)
BstC8I
(in
Bio.Restriction.Restriction
)
benner6
(in
Bio.SubsMat.MatrixInfo
)
BpuMI
(in
Bio.Restriction.Restriction
)
BstDEI
(in
Bio.Restriction.Restriction
)
benner74
(in
Bio.SubsMat.MatrixInfo
)
branch_length()
(in
Writer
)
BstDSI
(in
Bio.Restriction.Restriction
)
BetI
(in
Bio.Restriction.Restriction
)
BranchColor
(in
Bio.Phylo.BaseTree
)
BstEII
(in
Bio.Restriction.Restriction
)
between()
(in
Analysis
)
BranchColor
(in
Bio.Phylo.PhyloXML
)
BstENI
(in
Bio.Restriction.Restriction
)
BetweenPosition
(in
Bio.SeqFeature
)
branchlength2support()
(in
Tree
)
BstF5I
(in
Bio.Restriction.Restriction
)
bf_search()
(in
Bio.Pathway.Rep.MultiGraph
)
bs
(in
Bio.Sequencing.Ace
)
BstFNI
(in
Bio.Restriction.Restriction
)
BfaI
(in
Bio.Restriction.Restriction
)
Bsa29I
(in
Bio.Restriction.Restriction
)
BstH2I
(in
Bio.Restriction.Restriction
)
BfaSII
(in
Bio.Restriction.Restriction
)
BsaAI
(in
Bio.Restriction.Restriction
)
BstHHI
(in
Bio.Restriction.Restriction
)
BfiI
(in
Bio.Restriction.Restriction
)
BsaBI
(in
Bio.Restriction.Restriction
)
BstKTI
(in
Bio.Restriction.Restriction
)
BfmI
(in
Bio.Restriction.Restriction
)
BsaHI
(in
Bio.Restriction.Restriction
)
BstMAI
(in
Bio.Restriction.Restriction
)
BfoI
(in
Bio.Restriction.Restriction
)
BsaI
(in
Bio.Restriction.Restriction
)
BstMBI
(in
Bio.Restriction.Restriction
)
BfrI
(in
Bio.Restriction.Restriction
)
BsaJI
(in
Bio.Restriction.Restriction
)
BstMCI
(in
Bio.Restriction.Restriction
)
BfuAI
(in
Bio.Restriction.Restriction
)
BsaWI
(in
Bio.Restriction.Restriction
)
BstMWI
(in
Bio.Restriction.Restriction
)
BfuI
(in
Bio.Restriction.Restriction
)
BsaXI
(in
Bio.Restriction.Restriction
)
BstNI
(in
Bio.Restriction.Restriction
)
Bga514I
(in
Bio.Restriction.Restriction
)
BsbI
(in
Bio.Restriction.Restriction
)
BstNSI
(in
Bio.Restriction.Restriction
)
bgcolor
(in
Graphics
)
Bsc4I
(in
Bio.Restriction.Restriction
)
BstPAI
(in
Bio.Restriction.Restriction
)
BglI
(in
Bio.Restriction.Restriction
)
BscAI
(in
Bio.Restriction.Restriction
)
BstPI
(in
Bio.Restriction.Restriction
)
BglII
(in
Bio.Restriction.Restriction
)
BscGI
(in
Bio.Restriction.Restriction
)
BstSCI
(in
Bio.Restriction.Restriction
)
bgzf
(in
Bio
)
Bse118I
(in
Bio.Restriction.Restriction
)
BstSFI
(in
Bio.Restriction.Restriction
)
BgzfBlocks()
(in
Bio.bgzf
)
Bse1I
(in
Bio.Restriction.Restriction
)
BstSLI
(in
Bio.Restriction.Restriction
)
BgzfReader
(in
Bio.bgzf
)
Bse21I
(in
Bio.Restriction.Restriction
)
BstSNI
(in
Bio.Restriction.Restriction
)
BgzfWriter
(in
Bio.bgzf
)
Bse3DI
(in
Bio.Restriction.Restriction
)
BstUI
(in
Bio.Restriction.Restriction
)
BIG
(in
Bio.codonalign.chisq
)
Bse8I
(in
Bio.Restriction.Restriction
)
BstV1I
(in
Bio.Restriction.Restriction
)
BIGINV
(in
Bio.codonalign.chisq
)
BseAI
(in
Bio.Restriction.Restriction
)
BstV2I
(in
Bio.Restriction.Restriction
)
binary_characters()
(in
Parser
)
BseBI
(in
Bio.Restriction.Restriction
)
BstX2I
(in
Bio.Restriction.Restriction
)
binary_characters()
(in
Writer
)
BseCI
(in
Bio.Restriction.Restriction
)
BstXI
(in
Bio.Restriction.Restriction
)
BinaryCharacters
(in
Bio.Phylo.PhyloXML
)
BseDI
(in
Bio.Restriction.Restriction
)
BstYI
(in
Bio.Restriction.Restriction
)
BinI
(in
Bio.Restriction.Restriction
)
BseGI
(in
Bio.Restriction.Restriction
)
BstZ17I
(in
Bio.Restriction.Restriction
)
Bio
BseJI
(in
Bio.Restriction.Restriction
)
BstZI
(in
Bio.Restriction.Restriction
)
BiopythonDeprecationWarning
(in
Bio
)
BseLI
(in
Bio.Restriction.Restriction
)
Bsu15I
(in
Bio.Restriction.Restriction
)
BiopythonExperimentalWarning
(in
Bio
)
BseMI
(in
Bio.Restriction.Restriction
)
Bsu36I
(in
Bio.Restriction.Restriction
)
BiopythonParserWarning
(in
Bio
)
BseMII
(in
Bio.Restriction.Restriction
)
BsuI
(in
Bio.Restriction.Restriction
)
BiopythonWarning
(in
Bio
)
BseNI
(in
Bio.Restriction.Restriction
)
BsuRI
(in
Bio.Restriction.Restriction
)
BioSeq
(in
BioSQL
)
BsePI
(in
Bio.Restriction.Restriction
)
BsuTUI
(in
Bio.Restriction.Restriction
)
BioSeqDatabase
(in
BioSQL
)
BseRI
(in
Bio.Restriction.Restriction
)
BtgI
(in
Bio.Restriction.Restriction
)
BioSeqDatabase
(in
BioSQL.BioSeqDatabase
)
BseSI
(in
Bio.Restriction.Restriction
)
BtgZI
(in
Bio.Restriction.Restriction
)
BioSQL
BseX3I
(in
Bio.Restriction.Restriction
)
BthCI
(in
Bio.Restriction.Restriction
)
BisI
(in
Bio.Restriction.Restriction
)
BseXI
(in
Bio.Restriction.Restriction
)
BtrI
(in
Bio.Restriction.Restriction
)
BkrAM31DI
(in
Bio.Restriction.Restriction
)
BseYI
(in
Bio.Restriction.Restriction
)
BtsCI
(in
Bio.Restriction.Restriction
)
Blast
(in
Bio
)
BsgI
(in
Bio.Restriction.Restriction
)
BtsI
(in
Bio.Restriction.Restriction
)
Blast
(in
Bio.Blast.Record
)
Bsh1236I
(in
Bio.Restriction.Restriction
)
BtsIMutI
(in
Bio.Restriction.Restriction
)
blast_cutoff()
(in
_ParametersConsumer
)
Bsh1285I
(in
Bio.Restriction.Restriction
)
BtuMI
(in
Bio.Restriction.Restriction
)
blast_tab
(in
Bio.SearchIO.BlastIO
)
BshFI
(in
Bio.Restriction.Restriction
)
buffers()
(in
Commercially_available
)
blast_text
(in
Bio.SearchIO.BlastIO
)
BshNI
(in
Bio.Restriction.Restriction
)
buffers()
(in
Not_available
)
blast_xml
(in
Bio.SearchIO.BlastIO
)
BshTI
(in
Bio.Restriction.Restriction
)
build()
(in
Bio.codonalign
)
BlastErrorParser
(in
Bio.SearchIO._legacy.NCBIStandalone
)
BshVI
(in
Bio.Restriction.Restriction
)
build_peptides()
(in
_PPBuilder
)
BlastIO
(in
Bio.SearchIO
)
BsiEI
(in
Bio.Restriction.Restriction
)
build_resnum_list()
(in
FSSPAlignDict
)
blastn
(in
DistanceCalculator
)
BsiHKAI
(in
Bio.Restriction.Restriction
)
build_tree()
(in
DistanceTreeConstructor
)
BlastParser
(in
Bio.Blast.NCBIXML
)
BsiHKCI
(in
Bio.Restriction.Restriction
)
build_tree()
(in
ParsimonyTreeConstructor
)
BlastParser
(in
Bio.SearchIO._legacy.NCBIStandalone
)
BsiI
(in
Bio.Restriction.Restriction
)
build_tree()
(in
TreeConstructor
)
BlastTabIndexer
(in
Bio.SearchIO.BlastIO.blast_tab
)
BsiSI
(in
Bio.Restriction.Restriction
)
Bve1B23I
(in
Bio.Restriction.Restriction
)
BlastTableEntry
(in
Bio.Blast.ParseBlastTable
)
BsiWI
(in
Bio.Restriction.Restriction
)
BveI
(in
Bio.Restriction.Restriction
)
BlastTableReader
(in
Bio.Blast.ParseBlastTable
)
BsiYI
(in
Bio.Restriction.Restriction
)
BwaAlignCommandline
(in
Bio.Sequencing.Applications._bwa
)
BlastTableRec
(in
Bio.Blast.ParseBlastTable
)
BslFI
(in
Bio.Restriction.Restriction
)
BwaBwaswCommandline
(in
Bio.Sequencing.Applications._bwa
)
BlastTabParser
(in
Bio.SearchIO.BlastIO.blast_tab
)
BslI
(in
Bio.Restriction.Restriction
)
BwaIndexCommandline
(in
Bio.Sequencing.Applications._bwa
)
BlastTabWriter
(in
Bio.SearchIO.BlastIO.blast_tab
)
BsmAI
(in
Bio.Restriction.Restriction
)
BwaMemCommandline
(in
Bio.Sequencing.Applications._bwa
)
BlastTextParser
(in
Bio.SearchIO.BlastIO.blast_text
)
BsmBI
(in
Bio.Restriction.Restriction
)
BwaSampeCommandline
(in
Bio.Sequencing.Applications._bwa
)
BlastXmlIndexer
(in
Bio.SearchIO.BlastIO.blast_xml
)
BsmFI
(in
Bio.Restriction.Restriction
)
BwaSamseCommandline
(in
Bio.Sequencing.Applications._bwa
)
BlastXmlParser
(in
Bio.SearchIO.BlastIO.blast_xml
)
BsmI
(in
Bio.Restriction.Restriction
)
byte2int()
(in
Bio.SeqIO.NibIO
)
BlastXmlWriter
(in
Bio.SearchIO.BlastIO.blast_xml
)
BsnI
(in
Bio.Restriction.Restriction
)
BlatIO
(in
Bio.SearchIO
)
Bso31I
(in
Bio.Restriction.Restriction
)
Trees
Indices
Help
Biopython
Generated by Epydoc 3.0.1 on Wed Nov 6 13:31:57 2019
http://epydoc.sourceforge.net