Package Bio :: Package Blast :: Module ParseBlastTable

Module ParseBlastTable

A parser for the NCBI blastpgp version 2.2.5 output format. Currently only supports
the '-m 9' option, (table w/ annotations).
Returns a BlastTableRec instance

Classes

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BlastTableEntry

BlastTableRec

BlastTableReader

Variables

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reader_keywords = {'BLASTP': 'version', 'Database': 'database'...

Variables Details

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reader_keywords

Value:

{'BLASTP': 'version',
 'Database': 'database',
 'Fields': 'fields',
 'Iteration': 'iteration',
 'Query': 'query'}