Bio.PDB.Selection module
Selection of atoms, residues, etc.
- Bio.PDB.Selection.uniqueify(items)
Return a list of the unique items in the given iterable.
Order is NOT preserved.
- Bio.PDB.Selection.get_unique_parents(entity_list)
Translate a list of entities to a list of their (unique) parents.
- Bio.PDB.Selection.unfold_entities(entity_list, target_level)
Unfold entities list to a child level (e.g. residues in chain).
Unfold a list of entities to a list of entities of another level. E.g.:
list of atoms -> list of residues list of modules -> list of atoms list of residues -> list of chains
entity_list - list of entities or a single entity
target_level - char (A, R, C, M, S)
Note that if entity_list is an empty list, you get an empty list back:
>>> unfold_entities([], "A") []