Bio.Compass package
Module contents
Code to deal with COMPASS output, a program for profile/profile comparison.
Compass is described in:
Sadreyev R, Grishin N. COMPASS: a tool for comparison of multiple protein alignments with assessment of statistical significance. J Mol Biol. 2003 Feb 7;326(1):317-36.
Tested with COMPASS 1.24.
- Bio.Compass.read(handle)
Read a COMPASS file containing one COMPASS record.
- Bio.Compass.parse(handle)
Iterate over records in a COMPASS file.