Bio.PDB.Superimposer module
Superimpose two structures.
- class Bio.PDB.Superimposer.Superimposer
Bases:
object
Rotate/translate one set of atoms on top of another to minimize RMSD.
- __init__()
Initialize the class.
- set_atoms(fixed, moving)
Prepare translation/rotation to minimize RMSD between atoms.
Put (translate/rotate) the atoms in fixed on the atoms in moving, in such a way that the RMSD is minimized.
- Parameters:
fixed – list of (fixed) atoms
moving – list of (moving) atoms
- apply(atom_list)
Rotate/translate a list of atoms.