Bio.Nexus.StandardData module
Objects to represent NEXUS standard data type matrix coding.
- exception Bio.Nexus.StandardData.NexusError
Bases:
Exception
Provision for the management of Nexus exceptions.
- class Bio.Nexus.StandardData.StandardData(data)
Bases:
object
Create a StandardData iterable object.
Each coding specifies t [type] => (std [standard], multi [multistate] or uncer [uncertain]) and d [data]
- __init__(data)
Initialize the class.
- __len__()
Return the length of the coding, use len(my_coding).
- __getitem__(arg)
Pull out child by index.
- __iter__()
Iterate over the items.
- __next__()
Return next item.
- raw()
Return the full coding as a python list.
- __str__()
Return the full coding as a python string, use str(my_coding).