Bio.PDB.binary_cif module

A module to interact with BinaryCIF-formatted files.

class Bio.PDB.binary_cif.BinaryCIFParser

Bases: object

A parser for BinaryCIF files.

See the BinaryCIF specification.

__init__()

Initialize a BinaryCIF parser.

get_structure(id: str | None, source: str) → Structure

Parse and return the PDB structure from a BinaryCIF file.

Parameters:

• id (str) – the PDB code for this structure

• source (str) – the path to the BinaryCIF file

Returns:

the PDB structure

Return type:

Bio.PDB.Structure.Structure