Bio.PDB package¶
Subpackages¶
Submodules¶
- Bio.PDB.AbstractPropertyMap module
- Bio.PDB.Atom module
- Bio.PDB.Chain module
- Bio.PDB.DSSP module
- Bio.PDB.Dice module
- Bio.PDB.Entity module
- Bio.PDB.FragmentMapper module
- Bio.PDB.HSExposure module
- Bio.PDB.MMCIF2Dict module
- Bio.PDB.MMCIFParser module
- Bio.PDB.Model module
- Bio.PDB.NACCESS module
- Bio.PDB.NeighborSearch module
- Bio.PDB.PDBExceptions module
- Bio.PDB.PDBIO module
- Bio.PDB.PDBList module
- Bio.PDB.PDBParser module
- Bio.PDB.PICIO module
- Bio.PDB.PSEA module
- Bio.PDB.Polypeptide module
- Bio.PDB.Residue module
- Bio.PDB.ResidueDepth module
- Bio.PDB.SCADIO module
- Bio.PDB.Selection module
- Bio.PDB.Structure module
- Bio.PDB.StructureAlignment module
- Bio.PDB.StructureBuilder module
- Bio.PDB.Superimposer module
- Bio.PDB.ic_data module
- Bio.PDB.ic_rebuild module
- Bio.PDB.internal_coords module
- Bio.PDB.mmcifio module
- Bio.PDB.parse_pdb_header module
- Bio.PDB.vectors module
Module contents¶
Classes that deal with macromolecular crystal structures.
Includes: PDB and mmCIF parsers, a Structure class, a module to keep a local copy of the PDB up-to-date, selective IO of PDB files, etc.
Author: Thomas Hamelryck. Additional code by Kristian Rother.