Bio.PDB.Selection module¶
Selection of atoms, residues, etc.
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Bio.PDB.Selection.
uniqueify
(items)¶ Return a list of the unique items in the given iterable.
Order is NOT preserved.
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Bio.PDB.Selection.
get_unique_parents
(entity_list)¶ Translate a list of entities to a list of their (unique) parents.
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Bio.PDB.Selection.
unfold_entities
(entity_list, target_level)¶ Unfold entities list to a child level (e.g. residues in chain).
Unfold a list of entities to a list of entities of another level. E.g.:
list of atoms -> list of residues list of modules -> list of atoms list of residues -> list of chains
entity_list - list of entities or a single entity
target_level - char (A, R, C, M, S)
Note that if entity_list is an empty list, you get an empty list back:
>>> unfold_entities([], "A") []