Bio.ExPASy.Prodoc module¶
Code to work with the prosite.doc file from Prosite.
See https://www.expasy.org/prosite/
- Tested with:
Release 15.0, July 1998
Release 16.0, July 1999
Release 20.22, 13 November 2007
Release 20.43, 10 February 2009
- Functions:
read Read a Prodoc file containing exactly one Prodoc entry.
parse Iterates over entries in a Prodoc file.
- Classes:
Record Holds Prodoc data.
Reference Holds data from a Prodoc reference.
-
Bio.ExPASy.Prodoc.
read
(handle)¶ Read in a record from a file with exactly one Prodoc record.
-
Bio.ExPASy.Prodoc.
parse
(handle)¶ Iterate over the records in a Prodoc file.
-
class
Bio.ExPASy.Prodoc.
Record
¶ Bases:
object
Holds information from a Prodoc record.
- Attributes:
accession Accession number of the record.
prosite_refs List of tuples (prosite accession, prosite name).
text Free format text.
references List of reference objects.
-
__init__
(self)¶ Initialize the class.