Bio.ExPASy.Enzyme module¶
Parse the enzyme.dat file from Enzyme at ExPASy.
See https://www.expasy.org/enzyme/
Tested with the release of 03-Mar-2009.
- Functions:
read Reads a file containing one ENZYME entry
parse Reads a file containing multiple ENZYME entries
- Classes:
Record Holds ENZYME data.
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Bio.ExPASy.Enzyme.
parse
(handle)¶ Parse ENZYME records.
This function is for parsing ENZYME files containing multiple records.
- Arguments:
handle - handle to the file.
-
Bio.ExPASy.Enzyme.
read
(handle)¶ Read one ENZYME record.
This function is for parsing ENZYME files containing exactly one record.
- Arguments:
handle - handle to the file.
-
class
Bio.ExPASy.Enzyme.
Record
¶ Bases:
dict
Holds information from an ExPASy ENZYME record as a Python dictionary.
Each record contains the following keys:
ID: EC number
DE: Recommended name
AN: Alternative names (if any)
CA: Catalytic activity
CF: Cofactors (if any)
PR: Pointers to the Prosite documentation entrie(s) that correspond to the enzyme (if any)
DR: Pointers to the Swiss-Prot protein sequence entrie(s) that correspond to the enzyme (if any)
CC: Comments
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__init__
(self)¶ Initialize the class.
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__repr__
(self)¶ Return repr(self).
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__str__
(self)¶ Return str(self).