Bio.motifs.clusterbuster module¶
Parse Cluster Buster position frequency matrix files.
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class
Bio.motifs.clusterbuster.
Record
(iterable=(), /)¶ Bases:
list
Class to store the information in a Cluster Buster matrix table.
The record inherits from a list containing the individual motifs.
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__str__
(self)¶ Return str(self).
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Bio.motifs.clusterbuster.
read
(handle)¶ Read motifs in Cluster Buster position frequency matrix format from a file handle.
Cluster Buster motif format: http://zlab.bu.edu/cluster-buster/help/cis-format.html
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Bio.motifs.clusterbuster.
write
(motifs)¶ Return the representation of motifs in Cluster Buster position frequency matrix format.