Bio.SeqIO.AbiIO module
Bio.SeqIO parser for the ABI format.
ABI is the format used by Applied Biosystem’s sequencing machines to store sequencing results.
For more details on the format specification, visit: http://www6.appliedbiosystems.com/support/software_community/ABIF_File_Format.pdf
- class Bio.SeqIO.AbiIO.AbiIterator(source, trim=False)
Bases:
Bio.SeqIO.Interfaces.SequenceIteratorParser for Abi files.
- __init__(source, trim=False)
Return an iterator for the Abi file format.
- parse(handle)
Start parsing the file, and return a SeqRecord generator.
- iterate(handle)
Parse the file and generate SeqRecord objects.
- __abstractmethods__ = frozenset({})
- __annotations__ = {}
- __parameters__ = ()