Bio.PDB.Superimposer module¶
Superimpose two structures.
-
class
Bio.PDB.Superimposer.
Superimposer
¶ Bases:
object
Rotate/translate one set of atoms on top of another to minimize RMSD.
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__init__
(self)¶ Initialize the class.
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set_atoms
(self, fixed, moving)¶ Prepare translation/rotation to minimize RMSD between atoms.
Put (translate/rotate) the atoms in fixed on the atoms in moving, in such a way that the RMSD is minimized.
- Parameters
fixed – list of (fixed) atoms
moving – list of (moving) atoms
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apply
(self, atom_list)¶ Rotate/translate a list of atoms.
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