User contributions
From Biopython
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- 18:30, 19 March 2010 (hist) (diff) Google Summer of Code (→PDB-Tidy: command-line tools for manipulating PDB files: More abstract -- let students brainstorm) (top)
- 16:36, 19 March 2010 (hist) (diff) Google Summer of Code (→PDB-Tidy: command-line tools for manipulating PDB files: Anyone else want to co-mentor this?)
- 17:51, 17 March 2010 (hist) (diff) User:EricTalevich (Added outgoing links to aid the quest for contact info) (top)
- 15:29, 14 March 2010 (hist) (diff) m Google Summer of Code (→Biopython and PyCogent interoperability: changed phyloXML capitalization, relinked my name)
- 18:29, 12 March 2010 (hist) (diff) Google Summer of Code (→2010 Project ideas: Added PDB-Tidy idea)
- 04:26, 2 March 2010 (hist) (diff) Phylo (→Displaying trees: added draw_graphviz example images; fixed example code) (top)
- 04:06, 2 March 2010 (hist) (diff) N File:Phylo-apaf-node0.png (Dendrogram of apaf.xml drawn with Bio.Phylo.draw_graphviz(apaf, node_size=0).) (top)
- 04:05, 2 March 2010 (hist) (diff) N File:Phylo-apaf.png (Dendrogram of apaf.xml drawn with Bio.Phylo.draw_graphviz (default).) (top)
- 03:48, 2 March 2010 (hist) (diff) Phylo (→Displaying trees: draw_ascii has no labeller argument)
- 03:42, 2 March 2010 (hist) (diff) Phylo (→Displaying trees: added draw_ascii examples)
- 00:05, 25 February 2010 (hist) (diff) Documentation (→Presentations: Added my UGA presentation)
- 23:21, 24 February 2010 (hist) (diff) Phylo (Adding this page to the Wiki Documentation category, really)
- 23:19, 24 February 2010 (hist) (diff) Phylo (draw_ascii stub; adding this page to the Wiki Documentation category (?))
- 23:11, 24 February 2010 (hist) (diff) Active projects (→PhyloXML driver (GSoC): It's not a GSoC project anymore)
- 17:12, 25 January 2010 (hist) (diff) Phylo (Clarified availability)
- 17:04, 25 January 2010 (hist) (diff) PhyloXML (Merged "Availability" with the intro) (top)
- 16:56, 25 January 2010 (hist) (diff) PhyloXML (→Summer of Code project: Historical note)
- 03:54, 14 January 2010 (hist) (diff) Phylo (→Utilities: Reorg & described to_adjacency_matrix)
- 03:27, 14 January 2010 (hist) (diff) Phylo (→Sub-modules: No Phylo.IO; wiki-linked AlignIO)
- 03:25, 14 January 2010 (hist) (diff) Phylo (→write(): Caught a stray TreeIO reference)
- 03:22, 14 January 2010 (hist) (diff) PhyloXML (Replaced references to Bio.Tree with Phylo)
- 03:19, 14 January 2010 (hist) (diff) PhyloXML (Replaced references to TreeIO with Phylo)
- 03:15, 14 January 2010 (hist) (diff) PhyloXML (→PhyloXMLIO: Phylo.IO is gone now)
- 21:14, 10 January 2010 (hist) (diff) PhyloXML (→I/O functions: Replace TreeIO with Phylo)
- 21:12, 10 January 2010 (hist) (diff) TreeIO (Redirect to Phylo) (top)
- 21:11, 10 January 2010 (hist) (diff) Phylo (→I/O functions: Adapted submodules from the TreeIO page)
- 21:05, 10 January 2010 (hist) (diff) PhyloXML (→Availability: Point to Phylo)
- 21:01, 10 January 2010 (hist) (diff) Tree (Redirect to Phylo) (top)
- 20:59, 10 January 2010 (hist) (diff) Phylo (Adapted Availability, I/O, classes, utilities from Tree and TreeIO pages)
- 18:56, 10 January 2010 (hist) (diff) User:EricTalevich (Tree(IO) is now Phylo)
- 16:57, 10 January 2010 (hist) (diff) N Phylo (Started a stub (to reserve this page))
- 02:32, 24 September 2009 (hist) (diff) PhyloXML (→Example pipeline: Changed example file names)
- 02:25, 24 September 2009 (hist) (diff) PhyloXML (→I/O functions: write() returns the number of trees written, now)
- 02:21, 24 September 2009 (hist) (diff) PhyloXML (→Availability: pydot can substitute for pygraphviz)
- 19:27, 17 September 2009 (hist) (diff) PhyloXML (→Example pipeline: Showed how to automate the tree annotations)
- 16:36, 17 September 2009 (hist) (diff) PhyloXML (→Example pipeline: Added code for building the alignment)
- 14:57, 17 September 2009 (hist) (diff) m PhyloXML (→Availability)
- 14:55, 17 September 2009 (hist) (diff) PhyloXML (→Availability: Added optional dependencies for drawing)
- 14:31, 17 September 2009 (hist) (diff) User:EricTalevich (Status update.)
- 03:18, 15 August 2009 (hist) (diff) m PhyloXML (→About the format: rewording)
- 03:12, 15 August 2009 (hist) (diff) PhyloXML (→Using PhyloXML objects: Outlined an example pipeline)
- 02:20, 15 August 2009 (hist) (diff) PhyloXML (→About the format: Linked to Tree)
- 02:12, 15 August 2009 (hist) (diff) PhyloXML (→About the format: premium ASCII art tree diagram)
- 01:54, 15 August 2009 (hist) (diff) PhyloXML (→About the format: Example XML and Python object tree)
- 13:07, 13 August 2009 (hist) (diff) m TreeIO (→NewickIO: Newick is not NHX)
- 20:52, 12 August 2009 (hist) (diff) PhyloXML (→Performance: New numbers)
- 17:45, 12 August 2009 (hist) (diff) PhyloXML (Reorganized in light of Tree and TreeIO)
- 17:23, 12 August 2009 (hist) (diff) TreeIO (→parse(): Moved examples from PhyloXML)
- 16:47, 12 August 2009 (hist) (diff) Tree (Outline with stubs, examples of graph export)
- 15:55, 12 August 2009 (hist) (diff) TreeIO (Created outline and some short examples)
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