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The popgen module will contain modules to handle population genetics data.
The popgenmodule will contain modules to handle population genetics data.
Revision as of 11:49, 13 January 2009
Development page for the PopGen module.
The [popgen] module will contain modules to handle population genetics data.
Some use cases are hosted (temporarily) here:
Some of the code is actually been hosted on github:
how to contribute
The recommended way is to create an account on github (free), and then click on the 'Fork' button (something like http://github.com/dalloliogm/biopython---popgen/fork) and then start working on your separated branch. When you will have changes that you will consider functional, tell us and we will integrate in the ufficial popgen branch (mine?)
- support for a binary format - like HDF5 or this one: snpfile
- support for database: it is frequent to carry analysis on a big scale, so it is not unfrequent to use databases to store data