Participants

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Name Sebastian Bassi
E-mail sbassi@genesdigitales.com
Affiliation Universidad Nacional de Quilmes
Location Balcarce, Buenos Aires, Argentina
Uses Python for Bioinformatics and data manipulation
Work/Research Interests IT Manager Advanta Seeds in Balcarce Research Station
Biopython Contributions LCC and primer Tm calculation function
Relevant URL http://www.bioinformatica.info


Name Jeffrey Chang
E-mail jchang@smi.stanford.edu
Affiliation Postdoctoral Fellow, Duke University
Location Durham, NC
Uses Python for Eating spam
Work/Research Interests Bioinformatics
Biopython Contributions Co-Founder
Relevant URL http://www.jeffchang.com/


Name Brad Chapman
E-mail chapmanb@uga.edu
Affiliation University of Georgia
Location Athens, GA
Uses Python for Impressing my friends and family
Work/Research Interests Evolution by whole genome duplication in plants
Biopython Contributions Docs, GenBank, BioSQL, BioCORBA
Relevant URL http://www.bioinformatics.org/bradstuff


Name Peter Cock
E-mail See my web page
Affiliation MOAC Doctoral Training Centre, University of Warwick
Location Coventry, England, UK
Uses Python for Bioinformatics, controlling R with rpy, ...
Work/Research Interests Bacterial signalling
Biopython Contributions Sequence parsing including Bio.SeqIO, and the EMBL and GenBank parsers
Relevant URL http://www2.warwick.ac.uk/fac/sci/moac/currentstudents/peter_cock/python/


Name Andrew Dalke
E-mail dalke@dalkescientific.com
Affiliation Dalke Scientific Software, LLC
Location Santa Fe, NM
Uses Python for Just about anything
Work/Research Interests Large-scale usable systems for scientists
Biopython Contributions Co-Founder, Seq, Martel, indexing, EUtils, patterns, parsing, ...
Relevant URL http://www.dalkescientific.com/


Name Michiel de Hoon
E-mail See my web page
Affiliation Columbia University
Location New York
Uses Python for Systems Biology; Plotting
Work/Research Interests Microbiology
Biopython Contributions Bio.Cluster; Windows installer; self-proclaimed Biopython portability whip
Relevant URL http://bonsai.ims.u-tokyo.ac.jp/~mdehoon


Name Iddo Friedberg
E-mail idoerg "at" burnham.org
Affiliation The Burnham Institute
Location La-Jolla, CA, USA
Uses Python for Maintaining World Domination
Work/Research Interests Structural Bioinformatics
Biopython Contributions SubsMat, FSSP, bits of Align, bits of the Manual, and a lot of silly questions to the lists
Relevant URL http://iddo-friedberg.org


Name Christian Gunning
E-mail bioboy at uga dot edu
Affiliation human, mountain
Location Athens, GA
Uses Python for strings, as glue; also on laundry and dirty dishes
Work/Research Interests arabidopsis; Biological Sequence Analysis, Durbin et al.; Primer3; www.swig.org; R programming language and rpy.sourceforge.net
Biopython Contributions
Relevant URL http://www.botany.uga.edu/courses/bioinformatics/current/index.html


Name Thomas Hamelryck
E-mail thamelry - binf ku dk
Affiliation University of Copenhagen
Location Copenhagen, Denmark
Uses Python for Annoying FORTRAN programmers
Work/Research Interests Structural bioinformatics
Biopython Contributions Bio.PDB, KDTree, SVDSuperimposer
Relevant URL http://www.binf.ku.dk/users/thamelry


Name Michael Hoffman
E-mail grouse at alumni period utexas period net
Affiliation The University of Texas at Austin
Location Austin, TX, USA
Uses Python for Biopython!
Work/Research Interests RNA, Genome annotations
Biopython Contributions Bio.GFF, Bio.DocSQL
Relevant URL http://spice.cc.utexas.edu/~grouse/


Name Frank Kauff
E-mail fkauff at duke edu
Affiliation Duke University
Location Durham, NC, USA
Uses Python for Phylogenetics and everything else
Work/Research Interests Phylogenetics and all that's related
Biopython Contributions Phd (with C. Cox), Ace
Relevant URL http://www.lutzonilab.net/member/frankkauff.shtml


Name Chris Lasher
E-mail chris.lasher@gmail.com
Affiliation Virginia Bioinformatics Institute
Location Blacksburg, VA
Uses Python for Putting the joy back in programming
Work/Research Interests Bacterial genomics
Biopython Contributions Subversion migration
Relevant URL http://gotgenes.com/


Name Bartek Wilczyński
E-mail bartek_AT_rezolwenta.eu.org
Affiliation Institute of Mathematics, Polish Academy of Science
Location Warsaw, Poland
Uses Python for most of his computations
Work/Research Interests mathematical models of gene regulation
Biopython Contributions Bio.AlignAce
Relevant URL http://bartek.rezolwenta.eu.org


Name Harry Zuzan
E-mail iliketobicycle@yahoo.ca
Affiliation Genome Quebec
Location Montreal
Uses Python for you name it
Work/Research Interests Statistics applied to molecular biology and genetics
Biopython Contributions Affy package for Affymetrix data
Relevant URL http://www.oligopython.org
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