List of applications executed via Biopython

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(Applications: EMBOSS)
(Applications: BLAST)
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* [http://probcons.stanford.edu/ ProbCons]
 
* [http://probcons.stanford.edu/ ProbCons]
 
* [http://www.tcoffee.org/ T-Coffee]
 
* [http://www.tcoffee.org/ T-Coffee]
 +
 +
Bio.Blast
 +
 +
* [http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download NCBI BLAST+]
  
 
Bio.Emboss:
 
Bio.Emboss:
 +
 
* [http://emboss.open-bio.org/ EMBOSS]
 
* [http://emboss.open-bio.org/ EMBOSS]
  

Revision as of 17:25, 13 December 2013

(under construction)

Python libraries

NumPy

Reportlab (Bio.Graphics only)

Matplotlib (Bio.Phylo.draw and draw_graphviz only)

RDFLib (Bio.Phylo.CDAOIO only)

NetworkX (Bio.Phylo.to_networkx and draw_graphviz only)

PyGraphviz or Pydot (Bio.Phylo.draw_graphviz only)

Applications

Bio.Align:

Bio.Blast

Bio.Emboss:

Bio.PDB:

Bio.Phylo:

I am not particularly fond of the title of this page (tiago), if you have a better one, please correct

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