January 2009 Archives by thread

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Starting: Thu Jan 1 20:37:43 EST 2009
Ending: Fri Jan 30 11:54:20 EST 2009
Messages: 130

• [Biopython-dev] [Bug 2544] Bio.GenBank and SeqFeature improvements   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2544] Bio.GenBank and SeqFeature improvements   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2723] New: Clarify what applies to which version of biopython and other doc cleanup   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2723] Clarify what applies to which version of biopython and other doc cleanup   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2723] Minor corrections to the installation document   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2723] Minor corrections to the installation document   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2723] Minor corrections to the installation document   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2724] New: Unclear? changes between 1.47 and 1.49   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2724] Unclear? changes between 1.47 and 1.49   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2724] Unclear? changes between 1.47 and 1.49   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2671] Including GenomeDiagram in the main Biopython distribution   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2671] Including GenomeDiagram in the main Biopython distribution   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2718] Bio.Graphics and output file formats (PDF, EPS, SVG, and bitmaps)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2718] Bio.Graphics and output file formats (PDF, EPS, SVG, and bitmaps)   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] Structure and LDNe   Tiago Antão
  • [Biopython-dev] Structure and LDNe   Peter
    • [Biopython-dev] Structure and LDNe   Tiago Antão
      • [Biopython-dev] Structure and LDNe   Giovanni Marco Dall'Olio
      • [Biopython-dev] Structure and LDNe   Tiago Antão
      • [Biopython-dev] Structure and LDNe   Peter
      • [Biopython-dev] Structure and LDNe   Bruce Southey
      • [Biopython-dev] Developmental and experimental branches   Bruce Southey
      • [Biopython-dev] Developmental and experimental branches   Giovanni Marco Dall'Olio
      • [Biopython-dev] Developmental and experimental branches   Peter
      • [Biopython-dev] Developmental and experimental branches   Giovanni Marco Dall'Olio
      • [Biopython-dev] Developmental and experimental branches   Peter
      • [Biopython-dev] Developmental and experimental branches   Bartek Wilczynski
      • [Biopython-dev] Developmental and experimental branches   Brad Chapman
      • [Biopython-dev] Developmental and experimental branches   Peter
      • [Biopython-dev] Developmental and experimental branches   Tiago Antão
      • [Biopython-dev] Developmental and experimental branches   Peter
      • [Biopython-dev] Developmental and experimental branches   Giovanni Marco Dall'Olio
      • [Biopython-dev] Developmental and experimental branches   Tiago Antão
      • [Biopython-dev] Developmental and experimental branches   Tiago Antão
  • [Biopython-dev] Structure and LDNe   Bruce Southey
    • [Biopython-dev] Structure and LDNe   Tiago Antão
    • [Biopython-dev] Structure and LDNe   Jason Eshleman
      • [Biopython-dev] Structure and LDNe   Peter
      • [Biopython-dev] Structure and LDNe   Bruce Southey
      • [Biopython-dev] Structure and LDNe   Tiago Antão
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2727] New: PDB.Bio: header should include CRYST1 information   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2727] PDB.Bio: header should include CRYST1 information   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2727] PDB.Bio: header should include CRYST1 information   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2711] GenomeDiagram.py: write() and write_to_string() are inefficient and don't check inputs   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2729] New: Importing Bio.SeqUtils before importing pylab gives a "Bus Error"   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2729] Importing Bio.SeqUtils before importing pylab gives a "Bus Error"   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2729] Importing Bio.SeqUtils before importing pylab gives a "Bus Error"   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2729] Importing Bio.SeqUtils before importing pylab gives a "Bus Error"   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2729] Importing Bio.SeqUtils before importing pylab gives a "Bus Error"   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2729] Importing Bio.SeqUtils before importing pylab gives a "Bus Error"   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2729] Importing Bio.SeqUtils before importing pylab gives a "Bus Error"   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] Rethinking Biopython's testing framework   Michiel de Hoon
• [Biopython-dev] Developmental policies   Peter
  • [Biopython-dev] Developmental policies   Tiago Antão
    • [Biopython-dev] Developmental policies   Peter
      • [Biopython-dev] Developmental policies   Bruce Southey
      • [Biopython-dev] Developmental policies   Peter
      • [Biopython-dev] Developmental policies   Tiago Antão
      • [Biopython-dev] Developmental policies   Peter Cock
      • [Biopython-dev] Developmental policies   Bruce Southey
• [Biopython-dev] [Bug 2731] New: Adding .upper() and .lower() methods to the Seq object   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2731] Adding .upper() and .lower() methods to the Seq object   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2731] Adding .upper() and .lower() methods to the Seq object   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2731] Adding .upper() and .lower() methods to the Seq object   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2731] Adding .upper() and .lower() methods to the Seq object   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2532] Using IUPAC alphabets in mixed case Seq objects   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2351] Make Seq more like a string, even subclass string?   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] Alphabet case and standards   Bruce Southey
  • [Biopython-dev] Alphabet case and standards   Peter
• [Biopython-dev] Running Biopython tests on windows xp   Bruce Southey
  • [Biopython-dev] Running Biopython tests on windows xp   Peter
    • [Biopython-dev] Running Biopython tests on windows xp   Bruce Southey
      • [Biopython-dev] Running Biopython tests on windows xp   Peter
      • [Biopython-dev] Running Biopython tests on windows xp   Bruce Southey
      • [Biopython-dev] Running Biopython tests on windows xp   Peter
• [Biopython-dev] [Bug 2733] New: Unit tests incorrectly assume that Biopthyon was built from source   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2733] Unit tests incorrectly assume that Biopthyon was built from source   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2733] Unit tests incorrectly assume that Biopthyon was built from source   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2733] Runing unit tests where Biopthyon wasn't built from source   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2733] Runing unit tests where Biopthyon wasn't built from source   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2733] Runing unit tests where Biopthyon wasn't built from source   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2733] Runing unit tests where Biopthyon wasn't built from source   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2733] Runing unit tests where Biopthyon wasn't built from source   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2734] New: db.load problem with postgresql and psycopg2   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2734] db.load problem with postgresql and psycopg2   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2734] db.load problem with postgresql and psycopg2   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2734] db.load problem with postgresql and psycopg2   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2734] db.load problem with postgresql and psycopg2   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2734] db.load problem with postgresql and psycopg2   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2734] db.load problem with postgresql and psycopg2   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2738] New: Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2738] Speed up GenBank parsing, in particular location parsing   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2740] New: Wise test fails with wise 2.4.1   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2740] Wise test fails with wise 2.4.1   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2740] Wise test fails with wise 2.4.1   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2743] New: manual installation overwrites previous biopython installations   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2743] manual installation overwrites previous biopython installations   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2743] manual installation overwrites previous biopython installations   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2743] manual installation overwrites previous biopython installations   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2743] manual installation overwrites previous biopython installations   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2649] Bio.KDTree expects numpy array with dtype="float32" on 64 bit machines.   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2639] SeqRecord.init doesn't check for arguments for their types   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2697] MaxEntropy calculate function assumes integer values for class and convergence criteria is hard coded   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2697] MaxEntropy calculate function assumes integer values for class and convergence criteria is hard coded   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2697] MaxEntropy calculate function assumes integer values for class and convergence criteria is hard coded   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2697] MaxEntropy calculate function assumes integer values for class and convergence criteria is hard coded   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2745] New: Bio.GenBank.LocationParserError with a GenBank CON file   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2745] Bio.GenBank.LocationParserError with a GenBank CON file   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2745] Bio.GenBank.LocationParserError with a GenBank CON file   bugzilla-daemon at portal.open-bio.org
  • [Biopython-dev] [Bug 2745] Bio.GenBank.LocationParserError with a GenBank CON file   bugzilla-daemon at portal.open-bio.org
• [Biopython-dev] [Bug 2681] BioSQL: record annotations enhancements   bugzilla-daemon at portal.open-bio.org

Last message date: Fri Jan 30 11:54:20 EST 2009
Archived on: Fri Jan 30 11:54:23 EST 2009

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