Package Bio :: Package SeqIO :: Module _index :: Class UniprotRandomAccess
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Class UniprotRandomAccess

source code

               object --+            
                        |            
File._IndexedSeqFileProxy --+        
                            |        
          SeqFileRandomAccess --+    
                                |    
    SequentialSeqFileRandomAccess --+
                                    |
                                   UniprotRandomAccess

Random access to a UniProt XML file.
Instance Methods [hide private]
 
__iter__(self)
Returns (id,offset) tuples.
source code
 
get_raw(self, offset)
Similar to the get method, but returns the record as a raw string.
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get(self, offset)
Returns SeqRecord.
source code

Inherited from SequentialSeqFileRandomAccess: __init__

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__iter__(self)

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Returns (id,offset) tuples.
Overrides: File._IndexedSeqFileProxy.__iter__
(inherited documentation)

get_raw(self, offset)

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Similar to the get method, but returns the record as a raw string.
Overrides: File._IndexedSeqFileProxy.get_raw

get(self, offset)

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Returns SeqRecord.
Overrides: File._IndexedSeqFileProxy.get
(inherited documentation)