Package Bio :: Package SeqIO :: Module UniprotIO :: Class Parser
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Class Parser

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object --+
         |
        Parser

Parse a UniProt XML entry to a SeqRecord.

return_raw_comments=True to get back the complete comment field in XML format
alphabet=Alphabet.ProteinAlphabet()    can be modified if needed, default is protein alphabet.

Instance Methods [hide private]
 
__init__(self, elem, alphabet=ProteinAlphabet(), return_raw_comments=False)
x.__init__(...) initializes x; see help(type(x)) for signature
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parse(self)
Parse the input.
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Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, elem, alphabet=ProteinAlphabet(), return_raw_comments=False)
(Constructor)

source code 
x.__init__(...) initializes x; see help(type(x)) for signature

Overrides: object.__init__
(inherited documentation)