Package Bio :: Package SearchIO :: Module _index :: Class SearchIndexer

Class SearchIndexer

               object --+    
                        |    
File._IndexedSeqFileProxy --+
                            |
                           SearchIndexer

Known Subclasses:

Base class for file format specific random access.

Subclasses for each file format should define '_parser' and optionally
'get_raw' methods.

Instance Methods

[hide private]

__init__(self, filename, **kwargs)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature

source code

_parse(self, handle)

source code

get(self, offset)
Returns parsed object for this entry.

source code

Inherited from File._IndexedSeqFileProxy: __iter__, get_raw

Inherited from object: __delattr__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __str__

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

init(self, filename, **kwargs)
(Constructor)

source code

x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Overrides: object.__init__: (inherited documentation)

get(self, offset)

source code

Returns parsed object for this entry.

Overrides: File._IndexedSeqFileProxy.get: (inherited documentation)

Class SearchIndexer

__init__(self, filename, **kwargs) (Constructor)

get(self, offset)

init(self, filename, **kwargs)
(Constructor)