Package Bio :: Package SearchIO :: Package HmmerIO :: Module hmmer3_domtab :: Class Hmmer3DomtabParser

Class Hmmer3DomtabParser

                object --+    
                         |    
hmmer3_tab.Hmmer3TabParser --+
                             |
                            Hmmer3DomtabParser

Known Subclasses:

Base hmmer3-domtab iterator.

Instance Methods

[hide private]

_parse_row(self)
Returns a dictionary of parsed row values.

source code

_parse_qresult(self)
Generator function that returns QueryResult objects.

source code

Inherited from hmmer3_tab.Hmmer3TabParser: __init__, __iter__

Inherited from object: __delattr__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __str__

Properties

[hide private]

Inherited from object: __class__

Method Details

[hide private]

_parse_row(self)

source code

Returns a dictionary of parsed row values.

Overrides: hmmer3_tab.Hmmer3TabParser._parse_row

_parse_qresult(self)

source code

Generator function that returns QueryResult objects.

Overrides: hmmer3_tab.Hmmer3TabParser._parse_qresult