Package Bio :: Package SearchIO :: Package HmmerIO :: Module hmmer3_domtab
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Module hmmer3_domtab

source code

Bio.SearchIO parser for HMMER domain table output format.
Classes [hide private]
  Hmmer3DomtabParser
Base hmmer3-domtab iterator.
  Hmmer3DomtabHmmhitParser
HMMER domain table parser using hit coordinates.
  Hmmer3DomtabHmmqueryParser
HMMER domain table parser using query coordinates.
  Hmmer3DomtabHmmhitIndexer
HMMER domain table indexer using hit coordinates.
  Hmmer3DomtabHmmqueryIndexer
HMMER domain table indexer using query coordinates.
  Hmmer3DomtabHmmhitWriter
HMMER domain table writer using hit coordinates.
  Hmmer3DomtabHmmqueryWriter
HMMER domain table writer using query coordinates.
Variables [hide private]
  __package__ = 'Bio.SearchIO.HmmerIO'