Package Bio :: Package SearchIO :: Module FastaIO :: Class FastaM10Parser
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Class FastaM10Parser

source code

object --+
         |
        FastaM10Parser

Parser for Bill Pearson's FASTA suite's -m 10 output.

Instance Methods [hide private]
 
__init__(self, handle, _FastaM10Parser__parse_hit_table=False)
x.__init__(...) initializes x; see help(type(x)) for signature
source code
 
__iter__(self) source code
 
_parse_preamble(self)
Parses the Fasta preamble for Fasta flavor and version.
source code
 
__parse_hit_table(self)
Parses hit table rows.
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_parse_qresult(self) source code
 
_parse_hit(self, query_id) source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, handle, _FastaM10Parser__parse_hit_table=False)
(Constructor)

source code 
x.__init__(...) initializes x; see help(type(x)) for signature

Overrides: object.__init__
(inherited documentation)