Package Bio :: Package SCOP :: Module Hie
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Module Hie

source code

Handle the SCOP HIErarchy files, which describe the SCOP hierarchy in terms of SCOP unique identifiers (sunid).

The file format is described in the scop "release notes.":http://scop.berkeley.edu/release-notes-1.55.html The latest HIE file can be found "elsewhere at SCOP.":http://scop.mrc-lmb.cam.ac.uk/scop/parse/

"Release 1.55":http://scop.berkeley.edu/parse/dir.hie.scop.txt_1.55 (July 2001)

Classes [hide private]
  Record
Holds information for one node in the SCOP hierarchy.
Functions [hide private]
 
parse(handle)
Iterates over a HIE file as Hie records for each line.
source code
Variables [hide private]
  __package__ = None
hash(x)
Function Details [hide private]

parse(handle)

source code 

Iterates over a HIE file as Hie records for each line.

Arguments:

  • handle - file-like object.