Package Bio :: Package PopGen :: Package GenePop

Package GenePop


This module provides code to work with GenePop.

See http://wbiomed.curtin.edu.au/genepop/ , the format is documented
here: http://wbiomed.curtin.edu.au/genepop/help_input.html .

Classes:
Record           Holds GenePop data.

Functions:
read             Parses a GenePop record (file) into a Record object.


Partially inspired on MedLine Code.

Submodules

[hide private]

Bio.PopGen.GenePop.Controller: This module allows to control GenePop.
Bio.PopGen.GenePop.EasyController: This module allows to control GenePop through an easier interface.
Bio.PopGen.GenePop.FileParser: This class provides code to parse BIG GenePop files.
Bio.PopGen.GenePop.LargeFileParser: Large file parsing of Genepop files
Bio.PopGen.GenePop.Utils

Classes

[hide private]

Record
Holds information from a GenePop record.

Functions

[hide private]

get_indiv(line)

source code

read(handle)
Parses a handle containing a GenePop file.

source code

Function Details

[hide private]

read(handle)

source code

Parses a handle containing a GenePop file.

handle is a file-like object that contains a GenePop record.