Package Bio :: Package Phylo :: Module NeXMLIO :: Class Writer
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Class Writer

source code

object --+
         |
        Writer

Based on the writer in Bio.Nexus.Trees (str, to_string).
Instance Methods [hide private]
 
__init__(self, trees)
x.__init__(...) initializes x; see help(type(x)) for signature
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new_label(self, obj_type) source code
 
write(self, handle, cdao_to_obo=True, **kwargs)
Write this instance's trees to a file handle.
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_write_tree(self, clade, tree, parent=None, rooted=False)
Recursively process tree, adding nodes and edges to Tree object. Returns a set of all OTUs encountered.
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Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self, trees)
(Constructor)

source code 
x.__init__(...) initializes x; see help(type(x)) for signature

Overrides: object.__init__
(inherited documentation)