Package Bio :: Package HMM :: Module DynamicProgramming
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Module DynamicProgramming

source code

Dynamic Programming algorithms for general usage.

This module contains classes which implement Dynamic Programming
algorithms that can be used generally.

Classes [hide private]
  AbstractDPAlgorithms
An abstract class to calculate forward and backward probabilities.
  ScaledDPAlgorithms
Implement forward and backward algorithms using a rescaling approach.
  LogDPAlgorithms
Implement forward and backward algorithms using a log approach.
Variables [hide private]
  __package__ = 'Bio.HMM'