Package Bio :: Package Blast :: Module NCBIStandalone :: Class _BlastErrorConsumer
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Class _BlastErrorConsumer

source code

                    object --+        
                             |        
ParserSupport.AbstractConsumer --+    
                                 |    
                    object --+   |    
                             |   |    
               _HeaderConsumer --+    
                                 |    
                    object --+   |    
                             |   |    
          _DescriptionConsumer --+    
                                 |    
                    object --+   |    
                             |   |    
            _AlignmentConsumer --+    
                                 |    
                    object --+   |    
                             |   |    
                  _HSPConsumer --+    
                                 |    
                    object --+   |    
                             |   |    
       _DatabaseReportConsumer --+    
                                 |    
                    object --+   |    
                             |   |    
           _ParametersConsumer --+    
                                 |    
                    _BlastConsumer --+
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                                    _BlastErrorConsumer

Instance Methods [hide private]
 
__init__(self)
x.__init__(...) initializes x; see x.__class__.__doc__ for signature
source code
 
noevent(self, line) source code

Inherited from _BlastConsumer: end_alignment, end_database_report, end_descriptions, end_header, end_hsp, end_parameters, round, start_header

Inherited from ParserSupport.AbstractConsumer: __getattr__

Inherited from _HeaderConsumer: database_info, query_info, reference, version

Inherited from _DescriptionConsumer: converged, description, description_header, model_sequences, no_hits, nonmodel_sequences, start_descriptions

Inherited from _DescriptionConsumer (private): _parse

Inherited from _AlignmentConsumer: length, multalign, start_alignment, title

Inherited from _HSPConsumer: align, frame, identities, query, sbjct, score, start_hsp, strand

Inherited from _DatabaseReportConsumer: database, gapped, ka_params, ka_params_gap, num_letters_in_database, num_sequences_in_database, posted_date, start_database_report

Inherited from _ParametersConsumer: blast_cutoff, database_length, dropoff_1st_pass, effective_database_length, effective_hsp_length, effective_query_length, effective_search_space, effective_search_space_used, frameshift, gap_penalties, gap_trigger, gap_x_dropoff, gap_x_dropoff_final, hsps_gapped, hsps_no_gap, hsps_prelim_gapped, hsps_prelim_gapped_attempted, matrix, num_extends, num_good_extends, num_hits, num_seqs_better_e, num_sequences, query_length, start_parameters, threshold, window_size

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables [hide private]

Inherited from _HSPConsumer (private): _query_re, _sbjct_re

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self)
(Constructor)

source code 
x.__init__(...) initializes x; see x.__class__.__doc__ for signature

Overrides: object.__init__
(inherited documentation)