Package Bio :: Package Align :: Package Applications
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Source Code for Package Bio.Align.Applications

 1  # Copyright 2009 by Peter Cock & Cymon J. Cox.  All rights reserved. 
 2  # This code is part of the Biopython distribution and governed by its 
 3  # license.  Please see the LICENSE file that should have been included 
 4  # as part of this package. 
 5  """Alignment command line tool wrappers.""" 
 6   
 7  from ._Muscle import MuscleCommandline 
 8  from ._Clustalw import ClustalwCommandline 
 9  from ._ClustalOmega import ClustalOmegaCommandline 
10  from ._Prank import PrankCommandline 
11  from ._Mafft import MafftCommandline 
12  from ._Dialign import DialignCommandline 
13  from ._Probcons import ProbconsCommandline 
14  from ._TCoffee import TCoffeeCommandline 
15  from ._MSAProbs import MSAProbsCommandline 
16   
17  # Make this explicit, then they show up in the API docs 
18  __all__ = ["MuscleCommandline", 
19             "ClustalwCommandline", 
20             "ClustalOmegaCommandline", 
21             "PrankCommandline", 
22             "MafftCommandline", 
23             "DialignCommandline", 
24             "ProbconsCommandline", 
25             "TCoffeeCommandline", 
26             "MSAProbsCommandline", 
27             ] 
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