Package Bio :: Package Align :: Package Applications
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Source Code for Package Bio.Align.Applications

 1  # Copyright 2009 by Peter Cock & Cymon J. Cox.  All rights reserved. 
 2  # This code is part of the Biopython distribution and governed by its 
 3  # license.  Please see the LICENSE file that should have been included 
 4  # as part of this package. 
 5  """Alignment command line tool wrappers.""" 
 6   
 7  __docformat__ = "restructuredtext en"  # Don't just use plain text in epydoc API pages! 
 8   
 9  from ._Muscle import MuscleCommandline 
10  from ._Clustalw import ClustalwCommandline 
11  from ._ClustalOmega import ClustalOmegaCommandline 
12  from ._Prank import PrankCommandline 
13  from ._Mafft import MafftCommandline 
14  from ._Dialign import DialignCommandline 
15  from ._Probcons import ProbconsCommandline 
16  from ._TCoffee import TCoffeeCommandline 
17  from ._MSAProbs import MSAProbsCommandline 
18   
19  # Make this explicit, then they show up in the API docs 
20  __all__ = ["MuscleCommandline", 
21             "ClustalwCommandline", 
22             "ClustalOmegaCommandline", 
23             "PrankCommandline", 
24             "MafftCommandline", 
25             "DialignCommandline", 
26             "ProbconsCommandline", 
27             "TCoffeeCommandline", 
28             "MSAProbsCommandline", 
29             ] 
30