Package Bio :: Package Affy :: Module CelFile :: Class Record
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Class Record

source code

object --+
         |
        Record

Stores the information in a cel file

Example usage:

>>> from Bio.Affy import CelFile
>>> with open('Affy/affy_v3_example.CEL') as handle:
...     c = CelFile.read(handle)
...
>>> print(c.ncols, c.nrows)
5 5
>>> print(c.intensities)
[[   234.    170.  22177.    164.  22104.]
 [   188.    188.  21871.    168.  21883.]
 [   188.    193.  21455.    198.  21300.]
 [   188.    182.  21438.    188.  20945.]
 [   193.  20370.    174.  20605.    168.]]
>>> print(c.stdevs)
[[   24.     34.5  2669.     19.7  3661.2]
 [   29.8    29.8  2795.9    67.9  2792.4]
 [   29.8    88.7  2976.5    62.   2914.5]
 [   29.8    76.2  2759.5    49.2  2762. ]
 [   38.8  2611.8    26.6  2810.7    24.1]]
>>> print(c.npix)
[[25 25 25 25 25]
 [25 25 25 25 25]
 [25 25 25 25 25]
 [25 25 25 25 25]
 [25 25 25 25 25]]

Instance Methods [hide private]
 
__init__(self)
x.__init__(...) initializes x; see help(type(x)) for signature
source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties [hide private]

Inherited from object: __class__

Method Details [hide private]

__init__(self)
(Constructor)

source code 
x.__init__(...) initializes x; see help(type(x)) for signature

Overrides: object.__init__
(inherited documentation)